Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890221.1_cds_XP_016444891.1_39902
CDS Infomation

[gene=LOC107770135] [db_xref=GeneID:107770135] [protein=glutamic acid-rich protein-like] [protein_id=XP_016444891.1] [location=complement(join(12377..12933,13199..14225,21485..21562))] [gbkey=CDS]
Sequence

ATGTCTCGTTGCTTTCCATTTCCACCACCAGGATATGAAAAGAAGCCTAGACCGGAGGAT
GAGGACTTATTAAAAGAGGAGAAACGGAAGGAGAAAAAACATAAAAAGGAGAAGAAAGAC
AGAGAAAAGAAAGAAGGTAAAGAAAAAAGGGATAAAGACAGGAGTGACGGGAAACACAGG
GAAAAGAAAGACAAGAAGGATAAACACCGCGACAAGAAGGAAAAGCACAAGGATAAAAAG
GATAAAGAGAAGGACAAGGACAAGGATAAAGAGAGAAGTGACATCTCTGAAGAGGCAAGA
GTTGCCGTTCTACCAGGAGTTTCTAGTGGACAAAAGCTTCCTAGCAGAGATGAACATTTT
AAAAAAGAAAGCATCAACTCACAGGAAGCAAAATACCGCGATCAGTCTCATAGCCCGCAT
GCAGAAAAGCTCTTTAAAACCAGCCTCCCCACTGTTGAGACAGAGGAGTCAAAATTTGTA
CAGGAGTTGGCGAGGCGGATCAGAAATGAACAGAAGGGTGCAGGAAGTCAGTTGGCTGAG
AGATTTCCAGTTGAGTCGAAAAGGGATGAAAAGACAAACAGTATGTACATCAAGGATTTT
GGTAATTTTGTTGAAGAAAAGGAAAAGAAACAGGAGAAAAGAGTTTATTGCAATAAGATG
GATGGACATCAAGTCAGAGTTGAACCAAGAATTGGTGTTAATGCAACACTTCCCAGCTTT
CCGGAGATGGCAAAGAGCAAATTTCATGGATTGCCACCATTGGAAGAGAATGTTGAGAAC
AGGAGAGATGAAAAAGATAAATCCAAAGAACAACGAGATGACAAACCAAGAGACAAGAAA
AAGGATAAAGAAAAGGATGCGAAAAGTCATGGAAAGGAGAAAGACCGGGAAAAAGAAAAG
AAAAAGGAAAAGAAGGCGAAGGACAAAAGTGCACACAGGAAAAGTGAACCTGATAAATCA
AGAGACATCAATAAGAGCGATTTTGTTAGTGTTAGTAACACCAACCACCAAGTTCCACTT
GTACCCAAGGATAACAGAGCTGGTACAGTCACTGAGGGAAATCTCAGAAAAAGAAAAGAT
ATTGAAACAAATGGTTTCCTGCATGAGAGTGAAGTCAGGCCTGCTAAATTGCTGCGGCCC
TCATCCTCTCATCAGCCCACGCAGAATGGAAAGATATCGGATACTGACCAAAAGGCAGAA
ATGTTATCTTCCAACAAACAAGGAGTTGCCGCTGATGTGCAGGTGGTAAACAAGGAGCGC
AGTATTAATGGTACCATTAAGTTATCCAACAAACATGGAGTTGTCACTGATATTGGGTTC
GCAAACAAGGAGAACGGGGTCAATGGTACAGTCAAAGGTCAGCCATTGGCTATGTCTAAA
CCAAAGGCTTCTTCCATGTCTCCCGGTGTTGATCAGATTGCTGAAGCGTCTAAAAGACCT
CCTCATCCAGATTCCAAGTATCTGAACCAGATACTCTCAGTTCCGAAGATGGACGAGTGG
TCGGGAATTGATGACCAGGAATGGTTGTTTGGAAGCAAAAGTACTCTGGTTAGGAAGCCC
GACATGTATCTTGATGAAGTTAAGGACAATCGGGTATGGTCAGAAGCTTTGCAAATAGAC
TCTGCTGACGTTTGTGCGCTGCCATACGTAATACCTTATTGA

Peptide Sequence

PEP ID

XP_016444891.1
PEP Infomation

PREDICTED: glutamic acid-rich protein-like [Nicotiana tabacum]
Sequence

MSRCFPFPPPGYEKKPRPEDEDLLKEEKRKEKKHKKEKKDREKKEGKEKRDKDRSDGKHR
EKKDKKDKHRDKKEKHKDKKDKEKDKDKDKERSDISEEARVAVLPGVSSGQKLPSRDEHF
KKESINSQEAKYRDQSHSPHAEKLFKTSLPTVETEESKFVQELARRIRNEQKGAGSQLAE
RFPVESKRDEKTNSMYIKDFGNFVEEKEKKQEKRVYCNKMDGHQVRVEPRIGVNATLPSF
PEMAKSKFHGLPPLEENVENRRDEKDKSKEQRDDKPRDKKKDKEKDAKSHGKEKDREKEK
KKEKKAKDKSAHRKSEPDKSRDINKSDFVSVSNTNHQVPLVPKDNRAGTVTEGNLRKRKD
IETNGFLHESEVRPAKLLRPSSSHQPTQNGKISDTDQKAEMLSSNKQGVAADVQVVNKER
SINGTIKLSNKHGVVTDIGFANKENGVNGTVKGQPLAMSKPKASSMSPGVDQIAEASKRP
PHPDSKYLNQILSVPKMDEWSGIDDQEWLFGSKSTLVRKPDMYLDEVKDNRVWSEALQID
SADVCALPYVIPY

Transcript Sequence

Gene sequence data has not been registered.